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dbVar

Database of genomic structural variation

nsv5906067

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,121,477

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 11523 SVs from 108 studies. See in: genome view

Submitted genomic22,920,705-27,042,181

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5906067	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	22,920,705	27,042,181
nsv5906067	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	22,922,328	27,043,803

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17424842	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17424842	Submitted genomic		NC_000004.12:g.229 20705_27042181del	GRCh38 (hg38)		NC_000004.12	Chr4	22,920,705	27,042,181
nssv17424842	Remapped	Perfect	NC_000004.11:g.229 22328_27043803del	GRCh37.p13	First Pass	NC_000004.11	Chr4	22,922,328	27,043,803

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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