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dbVar

Database of genomic structural variation

nsv5945526

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,425

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 205 SVs from 35 studies. See in: genome view

Submitted genomic60,502,487-60,503,911

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5945526	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	60,502,487	60,503,911
nsv5945526	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	58,579,848	58,581,272

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17389357	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17389357	Submitted genomic		NC_000017.11:g.605 02487_60503911del	GRCh38 (hg38)		NC_000017.11	Chr17	60,502,487	60,503,911
nssv17389357	Remapped	Perfect	NC_000017.10:g.585 79848_58581272del	GRCh37.p13	First Pass	NC_000017.10	Chr17	58,579,848	58,581,272

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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