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dbVar

Database of genomic structural variation

nsv5946083

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:914,760

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 15404 SVs from 124 studies. See in: genome view

Submitted genomic105,691,298-106,606,057

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5946083	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000014.9	Chr14	105,691,298	106,606,057
nsv5946083	Remapped	Pass	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	106,157,635	106,929,356
nsv5946083	Remapped	Pass	GRCh37.p13	PATCHES	Second Pass	NW_004166863.1	Chr14\|NW_0 04166863.1	516,901	1,269,224

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17379837	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17379837	Submitted genomic		NC_000014.9:g.1056 91298_106606057del	GRCh38 (hg38)		NC_000014.9	Chr14	105,691,298	106,606,057
nssv17379837	Remapped	Pass	NW_004166863.1:g.5 16901_1269224del	GRCh37.p13	Second Pass	NW_004166863.1	Chr14\|NW_0 04166863.1	516,901	1,269,224
nssv17379837	Remapped	Pass	NC_000014.8:g.1061 57635_106929356del	GRCh37.p13	First Pass	NC_000014.8	Chr14	106,157,635	106,929,356

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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