Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5955580

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 428 SVs from 44 studies. See in: genome view

Submitted genomic143,981,861-143,981,861

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5955580	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000008.11	Chr8	143,981,861	143,981,861
nsv5955580	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000008.10	Chr8	145,056,029	145,056,029
nsv5955580	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_003315923.1	Chr8\|NW_00 3315923.1	320,506	320,506

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17431103	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17431103	Submitted genomic		NC_000008.11:g.143 981861_143981862in s305	GRCh38 (hg38)		NC_000008.11	Chr8	143,981,861	143,981,861
nssv17431103	Remapped	Perfect	NW_003315923.1:g.3 20506_320507ins305	GRCh37.p13	First Pass	NW_003315923.1	Chr8\|NW_00 3315923.1	320,506	320,506
nssv17431103	Remapped	Perfect	NC_000008.10:g.145 056029_145056030in s305	GRCh37.p13	Second Pass	NC_000008.10	Chr8	145,056,029	145,056,029

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI