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dbVar

Database of genomic structural variation

nsv5958618

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 150 SVs from 21 studies. See in: genome view

Submitted genomic177,396,942-177,396,942

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5958618	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	177,396,942	177,396,942
nsv5958618	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	178,261,670	178,261,670

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17402473	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17402473	Submitted genomic		NC_000002.12:g.177 396942_177396943in s238	GRCh38 (hg38)		NC_000002.12	Chr2	177,396,942	177,396,942
nssv17402473	Remapped	Perfect	NC_000002.11:g.178 261670_178261671in s238	GRCh37.p13	First Pass	NC_000002.11	Chr2	178,261,670	178,261,670

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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