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dbVar

Database of genomic structural variation

nsv5975044

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 120 SVs from 31 studies. See in: genome view

Submitted genomic53,558,881-53,558,881

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5975044	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000020.11	Chr20	53,558,881	53,558,881
nsv5975044	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000020.10	Chr20	52,175,420	52,175,420

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17400082	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17400082	Submitted genomic		NC_000020.11:g.535 58881_53558882ins6 6	GRCh38 (hg38)		NC_000020.11	Chr20	53,558,881	53,558,881
nssv17400082	Remapped	Perfect	NC_000020.10:g.521 75420_52175421ins6 6	GRCh37.p13	First Pass	NC_000020.10	Chr20	52,175,420	52,175,420

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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