nsv6116745
- Organism: Homo sapiens
- Study:nstd186 (NCBI Curated Common Structural Variants)
- Variant Type:mobile element insertion
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:52
- Description:nsv5417454 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 157 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 157 SVs from 31 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv6116745 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 25,446,403 | 25,446,454 |
nsv6116745 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 25,427,039 | 25,427,090 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17967841 | alu insertion | Curated | Curated |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17967841 | Remapped | Perfect | NC_000020.11:g.254 46403_25446454ins? | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 25,446,403 | 25,446,454 |
nssv17967841 | Submitted genomic | NC_000020.10:g.254 27039_25427090ins? | GRCh37 (hg19) | NC_000020.10 | Chr20 | 25,427,039 | 25,427,090 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv17967841 | 0.013 | 83 | 6404 |