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dbVar

Database of genomic structural variation

nsv6134226

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:43,710

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 169 SVs from 32 studies. See in: genome view

Remapped(Score: Perfect):85,402,350-85,446,059

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134226	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	85,402,350	85,402,358	85,446,046	85,446,059
nsv6134226	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	85,629,473	85,629,481	85,673,169	85,673,182

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17680707	deletion	SAMN20524656	Sequencing	Paired-end mapping	419

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17680707	Remapped	Perfect	NC_000002.12:g.(85 402350_85402358)_( 85446046_85446059) del	GRCh38.p12	First Pass	NC_000002.12	Chr2	85,402,350	85,402,358	85,446,046	85,446,059
nssv17680707	Submitted genomic		NC_000002.11:g.(85 629473_85629481)_( 85673169_85673182) del	GRCh37 (hg19)		NC_000002.11	Chr2	85,629,473	85,629,481	85,673,169	85,673,182

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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