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dbVar

Database of genomic structural variation

nsv6244777

Organism: Homo sapiens

Study:nstd215 (Prakrithi et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Prakrithi et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 115 SVs from 20 studies. See in: genome view

Submitted genomic123,123,197-123,123,197

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6244777	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	123,123,197	123,123,197
nsv6244777	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	122,458,892	122,458,892

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17857948	alu insertion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17857948	Submitted genomic		NC_000005.10:g.123 123197_123123198in s279	GRCh38 (hg38)		NC_000005.10	Chr5	123,123,197	123,123,197
nssv17857948	Remapped	Perfect	NC_000005.9:g.1224 58892_122458893ins 279	GRCh37.p13	First Pass	NC_000005.9	Chr5	122,458,892	122,458,892

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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