nsv6314091
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,296,333
- Description:GRCh37/hg19 20q13.33(chr20:61619222-62915555) AND not specified
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 8510 SVs from 111 studies. See in: genome view
Overlapping variant regions from other studies: 8512 SVs from 111 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6314091 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 62,987,870 | 64,284,202 |
| nsv6314091 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 61,619,222 | 62,915,555 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17969254 | copy number loss | Multiple | Multiple | not specified | Pathogenic | ClinVar | RCV002052718.3, VCV001526699.3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17969254 | Remapped | Perfect | NC_000020.11:g.(?_ 62987870)_(6428420 2_?)del | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 62,987,870 | 64,284,202 |
| nssv17969254 | Submitted genomic | NC_000020.10:g.(?_ 61619222)_(6291555 5_?)del | GRCh37 (hg19) | NC_000020.10 | Chr20 | 61,619,222 | 62,915,555 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17969254 | GRCh37: NC_000020.10:g.(?_61619222)_(62915555_?)del | copy number loss | germline | not specified | Pathogenic | ClinVar | RCV002052718.3, VCV001526699.3 |