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dbVar

Database of genomic structural variation

nsv6450925

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,900

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 94 SVs from 20 studies. See in: genome view

Submitted genomic99,905,401-99,907,300

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6450925	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000009.12	Chr9	99,905,401	99,907,300
nsv6450925	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	102,667,683	102,669,582

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18233941	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18233941	Submitted genomic		NC_000009.12:g.999 05401_99907300dup	GRCh38 (hg38)		NC_000009.12	Chr9	99,905,401	99,907,300
nssv18233941	Remapped	Perfect	NC_000009.11:g.102 667683_102669582du p	GRCh37.p13	First Pass	NC_000009.11	Chr9	102,667,683	102,669,582

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18233941	<0.001	3	38370

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