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dbVar

Database of genomic structural variation

nsv6628178

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:114,965

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 703 SVs from 68 studies. See in: genome view

Remapped(Score: Perfect):95,799,453-95,914,417

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6628178	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	95,799,453	95,914,417
nsv6628178	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	96,465,201	96,580,165

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18297582	duplication	OSC4866	SNP array	Probe signal intensity	nssv18297580, nssv18296697, nssv18297581
nssv18299680	duplication	OSC5273	SNP array	Probe signal intensity	7
nssv18299986	duplication	OSC5288	SNP array	Probe signal intensity	5
nssv18300965	duplication	OSC5557	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18297582	Remapped	Perfect	NC_000002.12:g.(?_ 95799453)_(9591441 7_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	95,799,453	95,914,417
nssv18299680	Remapped	Perfect	NC_000002.12:g.(?_ 95799453)_(9591441 7_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	95,799,453	95,914,417
nssv18299986	Remapped	Perfect	NC_000002.12:g.(?_ 95799453)_(9591441 7_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	95,799,453	95,914,417
nssv18300965	Remapped	Perfect	NC_000002.12:g.(?_ 95799453)_(9591441 7_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	95,799,453	95,914,417
nssv18297582	Submitted genomic		NC_000002.11:g.(?_ 96465201)_(9658016 5_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	96,465,201	96,580,165
nssv18299680	Submitted genomic		NC_000002.11:g.(?_ 96465201)_(9658016 5_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	96,465,201	96,580,165
nssv18299986	Submitted genomic		NC_000002.11:g.(?_ 96465201)_(9658016 5_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	96,465,201	96,580,165
nssv18300965	Submitted genomic		NC_000002.11:g.(?_ 96465201)_(9658016 5_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	96,465,201	96,580,165

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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