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dbVar

Database of genomic structural variation

nsv6628604

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:194,157

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1416 SVs from 96 studies. See in: genome view

Remapped(Score: Pass):97,091,641-97,285,797

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6628604	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nsv6628604	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	97,757,378	98,023,948

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18285398	deletion	OSC2727	SNP array	Probe signal intensity	6
nssv18291031	deletion	OSC0382	SNP array	Probe signal intensity	6
nssv18291162	deletion	OSC3784	SNP array	Probe signal intensity	5
nssv18292171	duplication	OSC0395	SNP array	Probe signal intensity	nssv18292481, nssv18291586, nssv18292167
nssv18305070	deletion	OSC0653	SNP array	Probe signal intensity	7
nssv18319965	deletion	OSC0987	SNP array	Probe signal intensity	10
nssv18325749	deletion	OSC1833	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18285398	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18291031	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18291162	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18292171	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)dup	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18305070	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18319965	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18325749	Remapped	Pass	NC_000002.12:g.(?_ 97091641)_(9728579 7_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	97,091,641	97,285,797
nssv18285398	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948
nssv18291031	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948
nssv18291162	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948
nssv18292171	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)dup	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948
nssv18305070	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948
nssv18319965	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948
nssv18325749	Submitted genomic		NC_000002.11:g.(?_ 97757378)_(9802394 8_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	97,757,378	98,023,948

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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