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dbVar

Database of genomic structural variation

nsv6631478

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:100,026

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1370 SVs from 103 studies. See in: genome view

Remapped(Score: Perfect):31,385,816-31,485,841

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6631478	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	31,385,816	31,485,841
nsv6631478	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	31,353,593	31,453,618

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282513	deletion	OSC2218	SNP array	Probe signal intensity	5
nssv18323284	deletion	OSC1392	SNP array	Probe signal intensity	nssv18322734, nssv18323003, nssv18323283

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282513	Remapped	Perfect	NC_000006.12:g.(?_ 31385816)_(3148584 1_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,385,816	31,485,841
nssv18323284	Remapped	Perfect	NC_000006.12:g.(?_ 31385816)_(3148584 1_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,385,816	31,485,841
nssv18282513	Submitted genomic		NC_000006.11:g.(?_ 31353593)_(3145361 8_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,353,593	31,453,618
nssv18323284	Submitted genomic		NC_000006.11:g.(?_ 31353593)_(3145361 8_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,353,593	31,453,618

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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