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dbVar

Database of genomic structural variation

nsv6631482

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:95,399

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1340 SVs from 103 studies. See in: genome view

Remapped(Score: Perfect):31,392,478-31,487,876

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6631482	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nsv6631482	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	31,360,255	31,455,653

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18302175	deletion	OSC5758	SNP array	Probe signal intensity	12
nssv18304316	deletion	OSC6234	SNP array	Probe signal intensity	11
nssv18304341	deletion	OSC6257	SNP array	Probe signal intensity	10
nssv18304835	deletion	OSC6157	SNP array	Probe signal intensity	7
nssv18305975	deletion	OSC6308	SNP array	Probe signal intensity	7
nssv18314806	deletion	OSC7996	SNP array	Probe signal intensity	12

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18302175	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148787 6_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nssv18304316	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148787 6_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nssv18304341	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148787 6_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nssv18304835	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148787 6_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nssv18305975	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148787 6_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nssv18314806	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148787 6_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,487,876
nssv18302175	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145565 3_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,455,653
nssv18304316	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145565 3_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,455,653
nssv18304341	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145565 3_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,455,653
nssv18304835	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145565 3_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,455,653
nssv18305975	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145565 3_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,455,653
nssv18314806	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145565 3_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,455,653

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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