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dbVar

Database of genomic structural variation

nsv6748895

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:26,700

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 201 SVs from 31 studies. See in: genome view

Submitted genomic67,544,201-67,570,900

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6748895	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	67,544,201	67,570,900
nsv6748895	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	68,409,919	68,436,618

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18692000	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18692000	Submitted genomic		NC_000004.12:g.675 44201_67570900dup	GRCh38 (hg38)		NC_000004.12	Chr4	67,544,201	67,570,900
nssv18692000	Remapped	Perfect	NC_000004.11:g.684 09919_68436618dup	GRCh37.p13	First Pass	NC_000004.11	Chr4	68,409,919	68,436,618

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18692000	2.9e-05	8	272996

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