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dbVar

Database of genomic structural variation

nsv6932229

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:728

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 145 SVs from 34 studies. See in: genome view

Submitted genomic14,700,657-14,701,384

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6932229	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000012.12	Chr12	14,700,657	14,701,384
nsv6932229	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	14,853,591	14,854,318

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18358329	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18358329	Submitted genomic		NC_000012.12:g.147 00657_14701384del	GRCh38 (hg38)		NC_000012.12	Chr12	14,700,657	14,701,384
nssv18358329	Remapped	Perfect	NC_000012.11:g.148 53591_14854318del	GRCh37.p13	First Pass	NC_000012.11	Chr12	14,853,591	14,854,318

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18358329	0.002	450	271324

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