Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7078262

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:467,753

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 834 SVs from 59 studies. See in: genome view

Submitted genomic107,064,984-107,532,736

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7078262	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	107,064,984	107,532,736
nsv7078262	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	106,308,214	106,775,966

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18653434	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18653434	Submitted genomic		NC_000023.11:g.107 064984_107532736du p	GRCh38 (hg38)		NC_000023.11	ChrX	107,064,984	107,532,736
nssv18653434	Remapped	Perfect	NC_000023.10:g.106 308214_106775966du p	GRCh37.p13	First Pass	NC_000023.10	ChrX	106,308,214	106,775,966

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18653434	9e-06	2	222222

You are here: NCBI