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Items: 1 to 20 of 29

1.

Methyl Gallate Alleviates Acute Ulcerative Colitis by Modulating Gut Microbiota and Inhibiting TLR4/NF-κB Pathway

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus; mouse gut metagenome
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL32553 GPL24247
26 Samples
Download data
Series
Accession:
GSE216435
ID:
200216435

2.

Methyl Gallate Alleviates Acute Ulcerative Colitis by Modulating Gut Microbiota and Inhibiting TLR4/NF-κB Pathway [16S]

(Submitter supplied) Ulcerative colitis (UC) is a complex immune-mediated inflammatory disease. In recent years, the incidence of UC has increased rapidly, however, its exact etiology and mechanism are still unclear. Based on the definite anti-inflammatory and antibacterial activities of Sanguisorba officinalis L., we studied its monomer methyl gallate (MG). In this study, we employed flow cytometry and detected nitric oxide production, finding MG regulated macrophage polarization and inhibited the expression of proinflammatory cytokines in vitro. more...
Organism:
mouse gut metagenome
Type:
Other
Platform:
GPL32553
17 Samples
Download data: TXT
Series
Accession:
GSE216433
ID:
200216433

3.

Spatial transcriptomics revealing host-microbe interactions

(Submitter supplied) We developed an analysis pipeline that can extract microbial sequences from Spatial Transcriptomic (ST) data and assign taxonomic labels, generating a spatial microbial abundance matrix in addition to the default host expression matrix, enabling simultaneous analysis of host expression and microbial distribution. We called the pipeline Spatial Meta-transcriptome (SMT) and applied it on both human and murine intestinal sections and validated the spatial microbial abundance information with alternative assays. more...
Organism:
mouse gut metagenome; Mus musculus
Type:
Other
Platforms:
GPL32553 GPL32554
10 Samples
Download data: PNG, RDS, TAR, TSV
Series
Accession:
GSE210738
ID:
200210738

4.

Illumina NovaSeq 6000 (mouse gut metagenome)

Organism:
mouse gut metagenome
3 Series
25 Samples
Download data
Platform
Accession:
GPL32553
ID:
100032553

5.

Colon tissue, model_4, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672638
ID:
306672638

SRA Run Selector

6.

Colon tissue, model_3, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672637
ID:
306672637

SRA Run Selector

7.

Colon tissue, model_2, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672636
ID:
306672636

SRA Run Selector

8.

Colon tissue, model_1, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672635
ID:
306672635

SRA Run Selector

9.

Colon tissue, MG_7, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672634
ID:
306672634

SRA Run Selector

10.

Colon tissue, MG_6, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672633
ID:
306672633

SRA Run Selector

11.

Colon tissue, MG_5, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672632
ID:
306672632

SRA Run Selector

12.

Colon tissue, MG_4, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672631
ID:
306672631

SRA Run Selector

13.

Colon tissue, MG_3, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with DSS water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672629
ID:
306672629

SRA Run Selector

14.

Colon tissue, MG_2, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672628
ID:
306672628

SRA Run Selector

15.

Colon tissue, MG_1, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672627
ID:
306672627

SRA Run Selector

16.

Colon tissue, normal_6, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672626
ID:
306672626

SRA Run Selector

17.

Colon tissue, normal_5, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672625
ID:
306672625

SRA Run Selector

18.

Colon tissue, normal_4, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672624
ID:
306672624

SRA Run Selector

19.

Colon tissue, normal_3, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672623
ID:
306672623

SRA Run Selector

20.

Colon tissue, normal_2, rep2

Organism:
mouse gut metagenome
Source name:
WT C57BL/6J with normal water
Platform:
GPL32553
Series:
GSE216433 GSE216435
Download data
Sample
Accession:
GSM6672622
ID:
306672622

SRA Run Selector

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