GSE222372[Accession] - GEO DataSets - NCBI

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Items: 14

Select item 2002223721.

The transcriptional factor Clr-5 is involved in cellulose degradation through regulation of amino acid metabolism in Neurospora crassa

(Submitter supplied) Filamentous fungi are one of the primary degraders of plant biomass because of their ability to produce enzymes that break down complex polysaccharides. The production of cellulolytic enzymes in fungi is dependent on transcription factors. In this article, we identified a N. crassa Zn2Cys6 transcription factor Clr5 that regulates the expression of cellulase on cellulose. N. crassa Δclr5 exhibited a significant decrease in secreted proteins (~46%), endo-glucanase (~55%), xylanase (~33%), β-glucosidase (~38%), and exocellulase (~40%) compared with the WT, while transcriptomic analysis revealed that clr5 was essential in cellulase expression. more...

Organism:: Neurospora crassa

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16164
12 Samples

Download data: XLSX

Series

Accession:: GSE222372

ID:: 200222372

PubMed Full text in PMC Similar studies

Select item 1000161642.

Illumina HiSeq 2000 (Neurospora crassa)

Organism:: Neurospora crassa

46 Series
419 Samples

Platform

Accession:: GPL16164

ID:: 100016164

Select item 3069217573.

Organism:: Neurospora crassa

Source name:: WT_Leu

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921757

ID:: 306921757

SRA Run Selector

Select item 3069217564.

Organism:: Neurospora crassa

Source name:: WT_Leu

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921756

ID:: 306921756

SRA Run Selector

Select item 3069217555.

Organism:: Neurospora crassa

Source name:: ∆clr5_Leu

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921755

ID:: 306921755

SRA Run Selector

Select item 3069217546.

Organism:: Neurospora crassa

Source name:: ∆clr5_Leu

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921754

ID:: 306921754

SRA Run Selector

Select item 3069217537.

Organism:: Neurospora crassa

Source name:: WT_His

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921753

ID:: 306921753

SRA Run Selector

Select item 3069217528.

Organism:: Neurospora crassa

Source name:: WT_His

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921752

ID:: 306921752

SRA Run Selector

Select item 3069217519.

Organism:: Neurospora crassa

Source name:: ∆clr5_His

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921751

ID:: 306921751

SRA Run Selector

Select item 30692175010.

Organism:: Neurospora crassa

Source name:: ∆clr5_His

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921750

ID:: 306921750

SRA Run Selector

Select item 30692174911.

Organism:: Neurospora crassa

Source name:: WT_Avicel

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921749

ID:: 306921749

SRA Run Selector

Select item 30692174812.

Organism:: Neurospora crassa

Source name:: WT_Avicel

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921748

ID:: 306921748

SRA Run Selector

Select item 30692174713.

∆clr5_Avicel_2

Organism:: Neurospora crassa

Source name:: ∆clr5_Avicel

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921747

ID:: 306921747

SRA Run Selector

Select item 30692174614.

∆clr5_Avicel_1

Organism:: Neurospora crassa

Source name:: ∆clr5_Avicel

Platform:: GPL16164
Series:: GSE222372

Sample

Accession:: GSM6921746

ID:: 306921746

SRA Run Selector

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