GSE226865[Accession] - GEO DataSets - NCBI

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Items: 17

Select item 2002268651.

Structure-first identification of RNA elements that regulate dengue virus genome architecture and replication

(Submitter supplied) The genomes of RNA viruses encode the information required for replication in host cells both in their linear sequence and in complex higher-order structures. A subset of these RNA genome structures show clear sequence conservation, and have been extensively described for well-characterized viruses. However, the extent to which viral RNA genomes contain functional structural elements – unable to be detected by sequence alone – that nonetheless are critical to viral fitness is largely unknown. more...

Organism:: dengue virus type 1; dengue virus type 3; dengue virus type 2; dengue virus type 4

Type:: Other

4 related Platforms
12 Samples

Download data: SHAPE, TXT

Series

Accession:: GSE226865

ID:: 200226865

PubMed Full text in PMC Similar studies

Select item 1000332242.

Illumina MiSeq (Dengue virus type 4)

Organism:: dengue virus type 4

1 Series
2 Samples

Platform

Accession:: GPL33224

ID:: 100033224

Select item 1000332233.

Illumina MiSeq (Dengue virus type 3)

Organism:: dengue virus type 3

1 Series
2 Samples

Platform

Accession:: GPL33223

ID:: 100033223

Select item 1000332224.

Illumina MiSeq (Dengue virus type 2)

Organism:: dengue virus type 2

1 Series
6 Samples

Platform

Accession:: GPL33222

ID:: 100033222

Select item 1000332215.

Illumina MiSeq (dengue virus type I)

Organism:: dengue virus type 1

1 Series
2 Samples

Platform

Accession:: GPL33221

ID:: 100033221

Select item 3070860696.

DENV4 ex virion RNA DMSO

Organism:: dengue virus type 4

Source name:: kidney

Platform:: GPL33224
Series:: GSE226865

Sample

Accession:: GSM7086069

ID:: 307086069

SRA Run Selector

Select item 3070860687.

DENV4 ex virion RNA 1M7

Organism:: dengue virus type 4

Source name:: kidney

Platform:: GPL33224
Series:: GSE226865

Download data: SHAPE, TXT

Sample

Accession:: GSM7086068

ID:: 307086068

SRA Run Selector

Select item 3070860678.

DENV3 ex virion RNA DMSO

Organism:: dengue virus type 3

Source name:: kidney

Platform:: GPL33223
Series:: GSE226865

Sample

Accession:: GSM7086067

ID:: 307086067

SRA Run Selector

Select item 3070860669.

DENV3 ex virion RNA 1M7

Organism:: dengue virus type 3

Source name:: kidney

Platform:: GPL33223
Series:: GSE226865

Download data: SHAPE, TXT

Sample

Accession:: GSM7086066

ID:: 307086066

SRA Run Selector

Select item 30708607310.

DENV2 8500 Lock Mutant in cell RNA DMSO

Organism:: dengue virus type 2

Source name:: kidney

Platform:: GPL33222
Series:: GSE226865

Sample

Accession:: GSM7086073

ID:: 307086073

SRA Run Selector

Select item 30708607211.

DENV2 8500 Lock Mutant in cell RNA SDA

Organism:: dengue virus type 2

Source name:: kidney

Platform:: GPL33222
Series:: GSE226865

Download data: TXT

Sample

Accession:: GSM7086072

ID:: 307086072

SRA Run Selector

Select item 30708607112.

DENV2 8500 WT in cell RNA DMSO

Organism:: dengue virus type 2

Source name:: kidney

Platform:: GPL33222
Series:: GSE226865

Sample

Accession:: GSM7086071

ID:: 307086071

SRA Run Selector

Select item 30708607013.

DENV2 8500 WT in cell RNA SDA

Organism:: dengue virus type 2

Source name:: kidney

Platform:: GPL33222
Series:: GSE226865

Download data: TXT

Sample

Accession:: GSM7086070

ID:: 307086070

SRA Run Selector

Select item 30708606514.

DENV2 ex virion RNA DMSO

Organism:: dengue virus type 2

Source name:: kidney

Platform:: GPL33222
Series:: GSE226865

Sample

Accession:: GSM7086065

ID:: 307086065

SRA Run Selector

Select item 30708606415.

DENV2 ex virion RNA 1M7

Organism:: dengue virus type 2

Source name:: kidney

Platform:: GPL33222
Series:: GSE226865

Download data: SHAPE, TXT

Sample

Accession:: GSM7086064

ID:: 307086064

SRA Run Selector

Select item 30708606316.

DENV1 ex virion RNA DMSO

Organism:: dengue virus type 1

Source name:: kidney

Platform:: GPL33221
Series:: GSE226865

Sample

Accession:: GSM7086063

ID:: 307086063

SRA Run Selector

Select item 30708606217.

DENV1 ex virion RNA 1M7

Organism:: dengue virus type 1

Source name:: kidney

Platform:: GPL33221
Series:: GSE226865

Download data: SHAPE, TXT

Sample

Accession:: GSM7086062

ID:: 307086062

SRA Run Selector

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