GSE267245[Accession] - GEO DataSets - NCBI

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Items: 14

Select item 2002672451.

RNAP stalling-derived genome instability underlies ribosomal antibiotics efficacy and resistance evolution (ChIP-seq data)

(Submitter supplied) Bacteria often evolve antibiotic resistance through mutagenesis. However, the processes causing the mutagenesis have not been fully resolved. Here we found that a broad range of ribosome-targeting antibiotics caused mutations through an underexplored pathway. Focusing on the clinically important aminoglycoside gentamicin, we found that the translation inhibitor caused genome-wide premature stalling of RNA polymerase (RNAP) in a loci-dependent manner. more...

Organism:: Escherichia coli

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL25368
12 Samples

Download data: BED, TXT

Series

Accession:: GSE267245

ID:: 200267245

Select item 1000253682.

Illumina NovaSeq 6000 (Escherichia coli)

Organism:: Escherichia coli

65 Series
972 Samples

Platform

Accession:: GPL25368

ID:: 100025368

Select item 3082629063.

Gentamicin 60 min, input DNA

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262906

ID:: 308262906

SRA Run Selector

Select item 3082629054.

Gentamicin 40 min, input DNA

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262905

ID:: 308262905

SRA Run Selector

Select item 3082629045.

Gentamicin 20 min, input DNA

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262904

ID:: 308262904

SRA Run Selector

Select item 3082629036.

0 min, input DNA

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262903

ID:: 308262903

SRA Run Selector

Select item 3082629027.

Gentamicin 60 min, Gam-3xFLAG ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262902

ID:: 308262902

SRA Run Selector

Select item 3082629018.

Gentamicin 40 min, Gam-3xFLAG ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262901

ID:: 308262901

SRA Run Selector

Select item 3082629009.

Gentamicin 20 min, Gam-3xFLAG ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262900

ID:: 308262900

SRA Run Selector

Select item 30826289910.

0 min, Gam-3xFLAG ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262899

ID:: 308262899

SRA Run Selector

Select item 30826289811.

Gentamicin 60 min, RpoB ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262898

ID:: 308262898

SRA Run Selector

Select item 30826289712.

Gentamicin 40 min, RpoB ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262897

ID:: 308262897

SRA Run Selector

Select item 30826289613.

Gentamicin 20 min, RpoB ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262896

ID:: 308262896

SRA Run Selector

Select item 30826289514.

0 min, RpoB ChIP-seq

Organism:: Escherichia coli

Source name:: BW25113 lacYI::lacIAM-Ptac-gam-3xFLAG

Platform:: GPL25368
Series:: GSE267245

Download data: TXT

Sample

Accession:: GSM8262895

ID:: 308262895

SRA Run Selector

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