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Items: 20

1.

Lysine acetylation effect in gene expression in Escherichia coli

(Submitter supplied) Although protein acetylation is widely observed, it has been associated with few specific regulatory functions making it poorly understood. To interrogate its functionality, we analyzed the acetylome in Escherichia coli knockout mutants of cobB, the only known sirtuin-like deacetylase, and patZ, the best-known protein acetyltransferase. For four growth conditions, more than 2,000 unique acetylated peptides, belonging to 809 proteins, were identified and differentially quantified. more...
Organism:
Escherichia coli; Escherichia coli K-12
Type:
Expression profiling by array
Platform:
GPL3154
18 Samples
Download data: CEL, TXT
Series
Accession:
GSE62094
ID:
200062094

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

[E_coli_2] Affymetrix E. coli Genome 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® E. coli Genome 2.0 Array contains probe sets to detect transcripts from the K12 strain of E. coli and three pathogenic strains of E. coli. Using the new E. coli Genome 2.0 Array, researchers can gain a comprehensive view of three pathogenic forms of E. more...
Organism:
Escherichia coli
10 DataSets
182 Series
1564 Samples
Download data
Platform
Accession:
GPL3154
ID:
100003154

3.

E. coli ∆patZ_chemostat_repl3

Organism:
Escherichia coli K-12
Source name:
E. coli ∆patZ grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep3
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519589
ID:
301519589

4.

E. coli ∆patZ_chemostat_repl2

Organism:
Escherichia coli K-12
Source name:
E. coli ∆patZ grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep2
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519588
ID:
301519588

5.

E. coli ∆patZ_chemostat_repl1

Organism:
Escherichia coli K-12
Source name:
E. coli ∆patZ grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep1
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519587
ID:
301519587

6.

E. coli ∆cobB_chemostat_repl3

Organism:
Escherichia coli K-12
Source name:
E. coli ∆cobB grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep3
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519586
ID:
301519586

7.

E. coli ∆cobB_chemostat_repl2

Organism:
Escherichia coli K-12
Source name:
E. coli ∆cobB grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep2
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519585
ID:
301519585

8.

E. coli ∆cobB_chemostat_repl1

Organism:
Escherichia coli K-12
Source name:
E. coli ∆cobB grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep1
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519584
ID:
301519584

9.

E. coli wt_chemostat_repl3

Organism:
Escherichia coli K-12
Source name:
E. coli wt grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep3
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519583
ID:
301519583

10.

E. coli wt_chemostat_repl2

Organism:
Escherichia coli K-12
Source name:
E. coli wt grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep2
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519582
ID:
301519582

11.

E. coli wt_chemostat_repl1

Organism:
Escherichia coli K-12
Source name:
E. coli wt grown in minimal media glucose limited chemostat at dilution rate of 0.2 h-1, biological rep1
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519581
ID:
301519581

12.

E. coli ∆patZ_batch_repl3

Organism:
Escherichia coli K-12
Source name:
E. coli ∆patZ grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep3
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519580
ID:
301519580

13.

E. coli ∆patZ_batch_repl2

Organism:
Escherichia coli K-12
Source name:
E. coli ∆patZ grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep2
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519579
ID:
301519579

14.

E. coli ∆patZ_batch_repl1

Organism:
Escherichia coli K-12
Source name:
E. coli ∆patZ grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep1
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519578
ID:
301519578

15.

E. coli ∆cobB_batch_repl3

Organism:
Escherichia coli K-12
Source name:
E. coli ∆cobB grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep3
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519577
ID:
301519577

16.

E. coli ∆cobB_batch_repl2

Organism:
Escherichia coli K-12
Source name:
E. coli ∆cobB grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep2
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519576
ID:
301519576

17.

E. coli ∆cobB_batch_repl1

Organism:
Escherichia coli K-12
Source name:
E. coli ∆cobB grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep1
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519575
ID:
301519575

18.

E. coli wt_batch_repl3

Organism:
Escherichia coli K-12
Source name:
E. coli wt grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep3
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519574
ID:
301519574

19.

E. coli wt_batch_repl2

Organism:
Escherichia coli K-12
Source name:
E. coli wt grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep2
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519573
ID:
301519573

20.

E. coli wt_batch_repl1

Organism:
Escherichia coli K-12
Source name:
E. coli wt grown in glucose batch minimal media, cells were harvested at exponential phase, biological rep1
Platform:
GPL3154
Series:
GSE62094
Download data: CEL
Sample
Accession:
GSM1519572
ID:
301519572

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