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Items: 1 to 20 of 100

1.

Hairpin Capture of DNA End Structures reveals chromosomal DNA end structure with single nucleotide resolution

(Submitter supplied) The structure of broken DNA ends is a critical determinant of the pathway used for DNA double strand break (DSB) repair. Here, we develop an approach, hairpin capture of DNA end structures (HCoDES), which elucidates chromosomal DNA end structures at single nucleotide resolution. HCoDES defines structures of physiologic DSBs generated by the RAG endonuclease, as well as those generated by nucleases widely used for genome editing. more...
Organism:
Mus musculus
Type:
Other
Platform:
GPL16417
98 Samples
Download data: TXT
Series
Accession:
GSE62534
ID:
200062534

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina MiSeq (Mus musculus)

Organism:
Mus musculus
938 Series
22204 Samples
Download data
Platform
Accession:
GPL16417
ID:
100016417

3.

Sleckman-BLig4-ZF-11-Ind1-TGAGGTTATCTCG_S4_L001_R1_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528556
ID:
301528556

SRA Run Selector

4.

Sleckman-BLig4-ZF-11-Ind1-TGAGGTTATCTCG_S4_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528555
ID:
301528555

SRA Run Selector

5.

Sleckman-BLig4-ZF-11-Ind2-GCTTAGAATCTCG_S5_L001_R1_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528554
ID:
301528554

SRA Run Selector

6.

Sleckman-BLig4-ZF-11-Ind2-GCTTAGAATCTCG_S5_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528553
ID:
301528553

SRA Run Selector

7.

Sleckman-BLig4-ZF-11-Ind3-ATGACAGATCTCG_S6_L001_R1_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528552
ID:
301528552

SRA Run Selector

8.

Sleckman-BLig4-ZF-11-Ind3-ATGACAGATCTCG_S6_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528551
ID:
301528551

SRA Run Selector

9.

B-Lig4-CJ-7-48hr-Kappa-shNT-Ind-43-TGTGCCA_S15_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528550
ID:
301528550

SRA Run Selector

10.

B-Lig4-CJ-7-48hr-Kappa-shNT-Ind-44-AACGGAG_S16_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528549
ID:
301528549

SRA Run Selector

11.

B-Lig4-CJ-7-48hr-Kappa-shNT-Ind-45-GATAGTT_S17_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528548
ID:
301528548

SRA Run Selector

12.

B-Lig4-CJ-7-48hr-Subst-shNT-Ind-66-GACACAG_S20_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528547
ID:
301528547

SRA Run Selector

13.

B-Lig4-CJ-7-48hr-Subst-shNT-Ind-67-AGGACCT_S21_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528546
ID:
301528546

SRA Run Selector

14.

B-Lig4-CJ-7-48hr-Subst-shNT-Ind-68-TTTTCGG_S22_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528545
ID:
301528545

SRA Run Selector

15.

Sleckman-LH8-110-inv-B5L-P548-K-Ind29-GTTCTCA_S22_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528544
ID:
301528544

SRA Run Selector

16.

Sleckman-LH8-110-inv-B5L-P548-K-Ind30-CTGGTGG_S23_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528543
ID:
301528543

SRA Run Selector

17.

Sleckman-LH8-110-inv-B5L-P548-K-Ind31-TGCCCAT_S24_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528542
ID:
301528542

SRA Run Selector

18.

MboII-Ind-7-KpnI-Ind7-AGACTGA_S65_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528541
ID:
301528541

SRA Run Selector

19.

Sleckman-ALig4-Cas9-Eb9314-Ind10-GGCAGCG_S1_L001_R1_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528540
ID:
301528540

SRA Run Selector

20.

Sleckman-ALig4-Cas9-Eb9314-Ind10-GGCAGCG_S1_L001_R2_001

Organism:
Mus musculus
Source name:
Abelson transformed pre-B cells
Platform:
GPL16417
Series:
GSE62534
Download data
Sample
Accession:
GSM1528539
ID:
301528539

SRA Run Selector

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db=gds|term=GSE62534[Accession]|query=1|qty=2|blobid=MCID_673404373ec0a11b4481e388|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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