GSM1110336[Accession] - GEO DataSets

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Items: 4

Select item 2000456001.

A unique herpesviral transcriptional program in KSHV-infected lymphatic endothelial cells leads to mTORC1 activation and rapamycin sensitivity

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Human herpesvirus 8 type M; Human herpesvirus 8 strain rKSHV.219; Human gammaherpesvirus 8; Homo sapiens

Type:: Expression profiling by genome tiling array

Platforms:: GPL16894 GPL10083
15 Samples

Download data: TXT

Series

Accession:: GSE45600

ID:: 200045600

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000455992.

Mock, latent, and lytic rKSHV.219-infected iSLK cells [Expt3]

(Submitter supplied) Expression profiling of stably infected epithelial cells using a custom tiling microarray. iSLK was infected with rKSHV.219 and selected with puromycin. Mock infected iSLK served as control for iSLK.219. Lytic reactivation of iSLK.219 was induced with 1 ug/mL doxycycline for 48 hours.

Organism:: Human gammaherpesvirus 8; Homo sapiens; Human herpesvirus 8 type M; Human herpesvirus 8 strain rKSHV.219

Type:: Expression profiling by genome tiling array

Platform:: GPL10083
3 Samples

Download data: TXT

Series

Accession:: GSE45599

ID:: 200045599

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000100833.

KSHV tiling microarray AMADID: 017577

(Submitter supplied) Probes based on KSHV (U75698.1) and Homo sapiens for select human transcripts. Protocol: Standard Agilent printing methods. 60-mer tiling oligonucleotides. Offset = 20nts from both strands of the KSHV genome (U75698.1). Platform contains both KSHV and human probes, all of which are used in the LOWESS normalization protocol Platform contains standard Agilent controls probes, including probes that detect spike-in control transcripts.

Organism:: Homo sapiens; Human herpesvirus 8 type M

4 Series
35 Samples

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Platform

Accession:: GPL10083

ID:: 100010083

Select item 3011103364.

latently rKSHV.219-infected inducible SLK

Organism:: Human gammaherpesvirus 8; Human herpesvirus 8 strain rKSHV.219; Homo sapiens

Source name:: latently infected iSLK.219 (channel 1) Common reference: mix of several different cell types (BJAB, BCBL, iSLK, iSLK.219), both latent and lytic. (channel 2)