GSM1859048[Accession] - GEO DataSets - NCBI

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Items: 3

Select item 2000722631.

DynaMO, a package identifying transcription factor binding sites in dynamical ChIPSeq/RNASeq datasets, identifies transcription factors driving yeast ultradian and mammalian circadian cycles

(Submitter supplied) Biological processes are usually associated with genome-wide remodeling of transcription driven by transcription factors (TFs). Identifying key TFs and their spatiotemporal binding patterns are indispensable to understanding how dynamic processes are programmed. We present a computational method, dynamic motif occupancy (DynaMO), which exploits random forest modeling and clustering based enrichment analysis. more...

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL17342
30 Samples

Download data: FPKM_TRACKING, TXT

Series

Accession:: GSE72263

ID:: 200072263

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000173422.

Illumina HiSeq 2500 (Saccharomyces cerevisiae)

Organism:: Saccharomyces cerevisiae

525 Series
10473 Samples

Platform

Accession:: GPL17342

ID:: 100017342

Select item 3018590483.

msn2Δmsn4Δ-RNA-t6

Organism:: Saccharomyces cerevisiae

Source name:: yeast cells in metabolic cycles

Platform:: GPL17342
Series:: GSE72263

Sample

Accession:: GSM1859048

ID:: 301859048

SRA Run Selector

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