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Items: 4

1.

Discovery of pre-mRNA structural scaffold as a contributor to mammalian splicing code

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Human adenovirus 2
Type:
Other
Platform:
GPL30034
59 Samples
Download data
Series
Accession:
GSE173178
ID:
200173178
2.

Discovery of a pre-mRNA structural scaffold as a contributor to the mammalian splicing code [in vitro]

(Submitter supplied) The specific recognition of splice signals at or near exon-intron junctions is not explained by their weak conservation and instead is postulated to require a multitude of features embedded in the pre-mRNA strand. We explored the possibility of three-dimensional structural scaffold of AdML – a model pre-mRNA substrate – guiding early spliceosomal components to the splice signal sequences. We find that mutations in the non-cognate splice signal sequences impede recruitment of early spliceosomal components due to disruption of the global structure of the pre-mRNA. more...
Organism:
Human adenovirus 2
Type:
Other
Platform:
GPL30034
50 Samples
Download data: SHAPE
Series
Accession:
GSE173175
ID:
200173175
3.

Illumina MiSeq (Human adenovirus 2)

Organism:
Human adenovirus 2
7 Series
81 Samples
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Platform
Accession:
GPL30034
ID:
100030034
4.

AdML+U1_snRNP_DMSO

Organism:
Human adenovirus 2
Source name:
In vitro transcribed from plasmid
Platform:
GPL30034
Series:
GSE173175 GSE173178
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Sample
Accession:
GSM5261497
ID:
305261497
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Supplemental Content

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