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Items: 4

1.

Interplay between bacterial RNA 5'-termini deNADding protein NudC and DEAD-box RNA helicase CsdA in stress-responses

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Escherichia coli
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32081
21 Samples
Download data: TSV
Series
Accession:
GSE224608
ID:
200224608
2.

5’-NAD-RNA identification in E. coli BW25113 wt, nudC and csdA knockouts

(Submitter supplied) In the present study we applied NAD captureSeq to charecterize the 5'-NAD-RNA profile of E. coli BW25113 wt strain as well as nudC and csdA knockouts. The data obtained showed that both knockouts resulted in an increased number of identified 5’-NAD-RNA species, thus suggesting that CsdA might add a potentially new layer of control on NAD-epitranscriptomic landscape.
Organism:
Escherichia coli
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32081
15 Samples
Download data: TSV
Series
Accession:
GSE224605
ID:
200224605
3.

NextSeq 2000 (Escherichia coli)

Organism:
Escherichia coli
13 Series
539 Samples
Download data
Platform
Accession:
GPL32081
ID:
100032081
4.

BW25113 wt, ADRPC+, rep1

Organism:
Escherichia coli
Source name:
E. coli K-12 background strain BW25113
Platform:
GPL32081
Series:
GSE224605 GSE224608
Download data: TSV
Sample
Accession:
GSM7027222
ID:
307027222
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Supplemental Content

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