GEO DataSets

(Submitter supplied) GAS strains were grown in THY broth to early exponential phase and RNA extracted. Targets from two biological replicates of each were generated and the expression profiles were determined using the RMLgenechip. Comparisons between the sample groups allow the identification of genes differentially expressed between strains. Keywords: repeat

Organism:

Coxiella burnetii; Chlamydia trachomatis; Streptococcus pyogenes; Borreliella burgdorferi; Staphylococcus aureus; Yersinia pestis

Type:

Expression profiling by array

Dataset:

GDS2349

Platform:

GPL2129

18 Samples

Download data: CEL

(Submitter supplied) GAS strains were grown in THY broth to early exponential phase and RNA extracted. cDNA was generated and the expression profiles were determined using the RMLgenechip. Comparisons between the sample groups allow the identification of genes differentially expressed between strains. This experiment compared pre- and post- mouse passaged GAS strains. Keywords: GAS comparison

Organism:

Coxiella burnetii; Streptococcus pyogenes; Borreliella burgdorferi; Chlamydia trachomatis; Staphylococcus aureus; Yersinia pestis

Type:

Expression profiling by array

Platform:

GPL2129

30 Samples

Download data: CEL

Analysis of group A streptococcus (GAS) clinical isolates from patients with significantly different disease manifestations: pharyngitis and invasive disease. Results identify two fundamentally different transcriptomes, thus providing insight into the phenotypic variation of this microbial pathogen.

Organism:

Borreliella burgdorferi; Yersinia pestis; Coxiella burnetii; Chlamydia trachomatis; Staphylococcus aureus; Streptococcus pyogenes

Type:

Expression profiling by array, count, 2 isolate sets

Platform:

GPL2129

Series:

GSE3900

18 Samples

Download data: CEL

(Submitter supplied) We report the mRNA expression profile of Streptococcus pyogeens Type M1 strain M1T15448-derived mutant lacking phospotyrosine phosphatase.

Organism:

Streptococcus pyogenes

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL18784

4 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Streptococcus dysgalactiae subsp. equisimilis GGS_124; Streptococcus dysgalactiae subsp. equisimilis

Type:

Expression profiling by array

Platform:

GPL17625

22 Samples

Download data: TXT

(Submitter supplied) Streptococcus dysgalactiae subsp. equeisimilis (SDSE) has Lancefield group G or C antigens. Recent epidemiological studies reveal that invasive SDSE infections have been increasing in Asia, Europe and US. Although SDSE possesses similar virulence factors to S. pyogenes including streptolysin S (SLS) and streptolysin O (SLO), some important S. pyogenes virulence factors including active superantigens, SpeB and a hyarulonic acids capsule are missing in SDSE genome. more...

Organism:

Streptococcus dysgalactiae subsp. equisimilis; Streptococcus dysgalactiae subsp. equisimilis GGS_124

Type:

Expression profiling by array

Platform:

GPL17625

9 Samples

Download data: TXT