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Links from GEO DataSets

Items: 20

1.

CP190-HB.BG3.CTCF_RNAi

(Submitter supplied) modENCODE_submission_3667 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. To do this, we are using RNAi to deplete individual non-histone chromosomal proteins in Drosophila BG3 and S2 tissue culture cells, and then using antibodies to perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32777
ID:
200032777

PubMed Full text in PMC Similar studies modENCODE

2.

Su(var)3-9-Q2598.Kc

(Submitter supplied) modENCODE_submission_3899 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32860
ID:
200032860

PubMed Full text in PMC Similar studies modENCODE

3.

Su(var)3-9-Q2598.D.mel 3rd Instar Larvae Nuclei

(Submitter supplied) modENCODE_submission_3898 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
7 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32859
ID:
200032859

PubMed Full text in PMC Similar studies modENCODE

4.

POF (MO 459).S2

(Submitter supplied) modENCODE_submission_3897 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
6 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32858
ID:
200032858

PubMed Full text in PMC Similar studies modENCODE

5.

Pho.S2

(Submitter supplied) modENCODE_submission_3894 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32857
ID:
200032857

PubMed Full text in PMC Similar studies modENCODE

6.

HP1 wa191.S2.HP1a_RNAi

(Submitter supplied) modENCODE_submission_3893 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The goal of these experiments are to validate and confirm the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. To do this, we are using RNAi to deplete individual non-histone chromosomal proteins in Drosophila BG3 and S2 tissue culture cells, and then using antibodies to perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32856
ID:
200032856

PubMed Full text in PMC Similar studies modENCODE

7.

H3K9me2-Ab2 (new lot).D.mel 3rd Instar Larvae Nuclei

(Submitter supplied) modENCODE_submission_3890 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32855
ID:
200032855

PubMed Full text in PMC Similar studies modENCODE

8.

H3K23ac.D.mel 3rd Instar Larvae Nuclei

(Submitter supplied) modENCODE_submission_3887 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
6 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32854
ID:
200032854

PubMed Full text in PMC Similar studies modENCODE

9.

ZW5.S2

(Submitter supplied) modENCODE_submission_3804 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32853
ID:
200032853

PubMed Full text in PMC Similar studies modENCODE

10.

ZW5.Kc

(Submitter supplied) modENCODE_submission_3803 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32852
ID:
200032852

PubMed Full text in PMC Similar studies modENCODE

11.

Smc3_Q2580.Kc

(Submitter supplied) modENCODE_submission_3800 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32851
ID:
200032851

PubMed Full text in PMC Similar studies modENCODE

12.

RNA Pol II (abcam).D.mel 3rd Instar Larvae Nuclei

(Submitter supplied) modENCODE_submission_3799 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
6 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32850
ID:
200032850

PubMed Full text in PMC Similar studies modENCODE

13.

Psc.Kc

(Submitter supplied) modENCODE_submission_3797 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32849
ID:
200032849

PubMed Full text in PMC Similar studies modENCODE

14.

POF (MO 459).D.mel 3rd Instar Larvae Nuclei Sexed Female

(Submitter supplied) modENCODE_submission_3795 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32848
ID:
200032848

PubMed Full text in PMC Similar studies modENCODE

15.

PCL Q3412.Kc

(Submitter supplied) modENCODE_submission_3792 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32847
ID:
200032847

PubMed Full text in PMC Similar studies modENCODE

16.

Pc.Kc

(Submitter supplied) modENCODE_submission_3791 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32846
ID:
200032846

PubMed Full text in PMC Similar studies modENCODE

17.

NURF301_Q2602.Kc

(Submitter supplied) modENCODE_submission_3790 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32845
ID:
200032845

PubMed Full text in PMC Similar studies modENCODE

18.

mod2.2-VC.Kc

(Submitter supplied) modENCODE_submission_3789 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32844
ID:
200032844

PubMed Full text in PMC Similar studies modENCODE

19.

MLE_Q4143.S2

(Submitter supplied) modENCODE_submission_3788 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32843
ID:
200032843

PubMed Full text in PMC Similar studies modENCODE

20.

MBD-R2(Q4167).Kc

(Submitter supplied) modENCODE_submission_3787 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6629
4 Samples
Download data: BEDGRAPH, CEL, GFF3
Series
Accession:
GSE32842
ID:
200032842

PubMed Full text in PMC Similar studies modENCODE

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