Similar studies for GEO DataSets (Select 200080536) - GEO DataSets

Select item 2000805361.

Identification and characterization of sex-biased microRNAs in Bactrocera dorsalis (Hendel)

(Submitter supplied) We constructed four small RNA libraries from whole body of females, males (except ovaries and testes) and ovaries, testes of B. dorsalis for deep sequencing. The data analysis revealed 314 known and 221 novel miRNAs from these libraries. 14 female-biased and 12 male-biased miRNAs that may be involved in sexual differentiation were found by comparing the miRNA expression profiles in the four libraries.

Organism:: Bactrocera dorsalis

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL21756
4 Samples

Download data: XLS

Series

Accession:: GSE80536

ID:: 200080536

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Select item 2001173102.

The widely conserved microRNA, miR-1-3p, is a male-determining factor in the oriental fruit fly, Bactrocera dorsalis

(Submitter supplied) We constructed three small RNA libraries from embryos at 5, 6 and 7 post-oviposition (hpo) of Bactrocera dorsalis for deep sequencing. The data analysis revealed 147 known and 103 novel miRNAs from these libraries.

Organism:: Bactrocera dorsalis

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL21756
3 Samples

Download data: XLS

Series

Accession:: GSE117310

ID:: 200117310

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Select item 2000570293.

Profiling and comparison of miRNA populations in male and female tissues from Drosophila melanogaster at various stages

(Submitter supplied) By surveying miRNA populations in each sex, we identified sets of miRNAs differentially expressed in male and female tissues across various stages of development.

Organism:: Drosophila melanogaster

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL11203
6 Samples

Download data: TXT

Series

Accession:: GSE57029

ID:: 200057029

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Select item 2000463104.

Bactrocera dorsalis Gene expression

(Submitter supplied) Comprehensive RNA sequencing was performed on a laboratory colony of B. dorsalis with a focus on attempting to capture as many genes in the sequencing from throughout the entire developmental life history. De novo assembly and analysis of the resulting sequence

Organism:: Bactrocera dorsalis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17054
6 Samples

Download data: TXT

Series

Accession:: GSE46310

ID:: 200046310

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Select item 2000725945.

Identification of miRNAs and its targets using high-throughput sequencing and degradome analysis in male and female Asparagus officinalis.

(Submitter supplied) Two independent small RNA (sRNA) libraries from male and female asparagus plants were sequenced, generating 4.13 and 5.88 million final cleaned reads, respectively. A total of 154 conserved miRNA belonging to 26 families, and 40 novel miRNA candidates that seemed to be specific to asparagus were identified, among them, 63 miRNAs exhibited significant differential expression between male and female plants, and 36 target mRNAs representing 44 conserved and fournovel miRNA in asparagus by high-throughput degradome sequencing analysis.

Organism:: Asparagus officinalis

Type:: Non-coding RNA profiling by high throughput sequencing; Other

Platform:: GPL20875
3 Samples

Download data: XLS

Series

Accession:: GSE72594

ID:: 200072594

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Select item 2000930196.

Integrated analysis of mRNA-seq and miRNA-seq reveals the potential roles of sex-biased miRNA-mRNA pairs in gonad tissue of dark sleeper (Odontobutis potamophila)

(Submitter supplied) We used next-generation sequencing technology to characterize mRNA-seq and miRNA-seq of testes and ovaries of Odontobutis potamophila to elucidate the molecular mechanisms of sex determination and differentiation. We were able to find miRNA-mRNA pairs using bioinformatics analysis and miRNA prediction algorithms.

Organism:: Odontobutis potamophila

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL22871
12 Samples

Download data: FASTA, XLSX

Series

Accession:: GSE93019

ID:: 200093019

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Select item 2000619847.

Identification and Characterization of MicroRNAs in Zebrafish Spermatozoa by Illumina Sequencing

(Submitter supplied) MicroRNAs (miRNAs) are involved in nearly every biological process examined to date. Mounting evidence show that some spermatozoa specific miRNAs play important roles in the regulation of spermatogenesis and germ cells development, but little is known of the exact identity and function of miRNA in sperm cells or their potential involvement in spermatogenesis and germ cells development. Here, we investigated the spermatozoa miRNA profiles using illumina deep sequencing combined with bioinformatic analysis using zebrafish as a model system. more...

Organism:: Danio rerio

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL14875
1 Sample

Download data: TXT

Series

Accession:: GSE61984

ID:: 200061984

PubMed Similar studies SRA Run Selector

Select item 2001020628.

Sex-biased miRNA expression in mouse, opossum and chicken

(Submitter supplied) Sexual dimorphism depends on sex-biased gene expression, but the contributions of microRNAs (miRNAs) have not been globally assessed. We therefore produced an extensive small RNA sequencing dataset to analyse male and female miRNA expression profiles in mouse, opossum and chicken. Our analyses uncovered numerous cases of somatic sex-biased miRNA expression, especially in the mouse heart and liver. Sex-biased expression is explained by miRNA-specific regulation, including sex-biased chromatin accessibility at promoters, rather than piggybacking of intronic miRNAs on sex-biased protein-coding genes. more...