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Items: 11

1.

Estimating mRNA lengths from Plasmodium falciparum genes by virtual northern RNA-seq analysis

(Submitter supplied) Accurate gene models are essential for understanding parasite biology. However, transcript structure information is lacking for most parasite genes. Here, we describe “virtual northern” analysis of the malaria parasite Plasmodium falciparum to address this issue. RNA-seq libraries were made from size-fractionated RNA. Transcript sizes for 3052 genes were inferred from the abundance signals in each library. more...
Organism:
Plasmodium falciparum K1
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20181
9 Samples
Download data: TXT
Series
Accession:
GSE68757
ID:
200068757

PubMed Similar studies SRA Run Selector

2.

Illumina MiSeq (Plasmodium falciparum K1)

Organism:
Plasmodium falciparum K1
1 Series
9 Samples
Download data
Platform
Accession:
GPL20181
ID:
100020181

3.

VN_seq_f8

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.8
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680588
ID:
301680588

SRA Run Selector

4.

VN_seq_f7

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.7
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680587
ID:
301680587

SRA Run Selector

5.

VN_seq_f6

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.6
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680586
ID:
301680586

SRA Run Selector

6.

VN_seq_f5

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.5
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680585
ID:
301680585

SRA Run Selector

7.

VN_seq_f4

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.4
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680584
ID:
301680584

SRA Run Selector

8.

VN_seq_f3

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.3
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680583
ID:
301680583

SRA Run Selector

9.

VN_seq_f2

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.2
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680582
ID:
301680582

SRA Run Selector

10.

VN_seq_f1

Organism:
Plasmodium falciparum K1
Source name:
size-fraction no.1
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680581
ID:
301680581

SRA Run Selector

11.

VN_seq_f0

Organism:
Plasmodium falciparum K1
Source name:
Unfractionated mRNA control
Platform:
GPL20181
Series:
GSE68757
Download data: TXT
Sample
Accession:
GSM1680580
ID:
301680580

SRA Run Selector

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db=gds|term=txid5839[Organism]|query=1|qty=2|blobid=MCID_67066bee91df3b340a97c60a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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