txid8845[Organism] - GEO DataSets

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Select item 2002438291.

Whole transcriptomic analysis of liver tissue from high-intake fed compared to normally-fed lion-head geese

(Submitter supplied) Lion-head goose is the only large goose species in China, and it was one of the largest goose species in the world. Our previous study firstly reported a chromosome-level genome assembly of Lion-head goose (Anser cygnoides), a native breed in South China, through the combination of PacBio, Bionano, and Hi-C technologies. The fat content of foie gras is augmented during its preparation due to the special feeding regimen. more...

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32723
6 Samples

Download data: XLSX

Series

Accession:: GSE243829

ID:: 200243829

Select item 2001447232.

RNA-seq Analysis on the Renal Tissue Injury in the Development of Goslings Gout

(Submitter supplied) The transcription expressions of gout goslings in renal tissues was significantly different from that of healthy goslings. With P <0.05 and |log2(fold change)| >1 as the selection standards, 1749 differential expression genes were found. Among these, 501 genes were up-regulated and 1248 genes were down-regulated in the gout group. The gene ontology (GO) search revealed many significant terms, including chemokine activity, T cell receptor binding, antigen binding, immune response, G-protein coupled receptor signaling pathway, chemokine-mediated signaling pathway, inflammatory response and so on. more...

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL28112
11 Samples

Download data: XLSX

Series

Accession:: GSE144723

ID:: 200144723

SRA Run Selector

Select item 2002131473.

Transcriptome Sequencing Reveals Pathways Related to Proliferation and Differentiation of Shitou Goose Myoblasts

(Submitter supplied) In this study, we cultured lion-headed goose myoblasts and induced their differentiation, followed by RNA-seq extraction of total RNA from proliferative and differentiated cells, respectively. The identified lncRNAs and mRNAs were analyzed, including enrichment analysis, alternative splicing, and construction of interaction networks.

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32723
6 Samples

Download data: TXT

Series

Accession:: GSE213147

ID:: 200213147

PubMed Full text in PMC Similar studies

Select item 2001329214.

Liver transcriptome profile in geese with different phenotypes of weight

(Submitter supplied) The unique fat storage and metabolic characteristics of goose liver is an important model for studying lipid metabolism in animals or humans. In this study, RNA sequencing technology was used to obtain the liver transcriptome of Sichuan white goose with significant weight difference in the same population, and differentially expressed genes and their pathways were identified, which may help to understand the mechanism of goose weight change. more...

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL26795
9 Samples

Download data: TXT

Series

Accession:: GSE132921

ID:: 200132921

SRA Run Selector

Select item 2001337705.

Dynamic gene expression atlas of goose granulosa cells during development stage

(Submitter supplied) the nine developmental stage, including small white follicles (SWF), large white follicles (LWF), small yellow follicles (SYF), large yellow follicles (LYF), the fifth largest follicle (F5), fourth largest follicle (F4), third largest follicle (F3), second largest follicle (F2) and the largest follicle (F1), respectively.

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL25525
45 Samples

Download data: TXT

Series

Accession:: GSE133770

ID:: 200133770

SRA Run Selector

Select item 2001333376.

Global Long Noncoding RNA and mRNA Expression Changes between Ovarian Granulosa Cell Treatment with GnRH agonist(Alarelin) and antagonist(Cetrorelix) in goose

(Submitter supplied) Gonadotropin-releasing hormone (GnRH) might combine with other reproductive hormones to affect follicular development by regulation of the cell cycle in granulosa cells (GCs).To investigate the function of GnRH in GCs, we examined the effects of a GnRH agonist (alarelin acetate) and an antagonist (cetrorelix acetate) on the proliferation of primary goose (Anser cygnoides) ovarian GCs by colorimetry and 5-ethynyl-2¢-deoxyuridine (EdU) cell proliferation assays. more...

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL26841
9 Samples

Download data: TXT

Series

Accession:: GSE133337

ID:: 200133337

SRA Run Selector

Select item 2001302457.

High throughput small RNA and transcriptome sequencing reveal reproduction-related microRNAs and mRNA in ovary of Geese in Counter-Season Production

(Submitter supplied) Purpose: To understand the function differences of goose at broody and breeding stage Methods: RNA-seq analysis of oviduct tissues in reproductive and broody goose Results: Our study screened differential expressed mRNA and pathways involved in broodiness Conclusions:The differential expressed mRNA and pathways identified in this study may contribute to understand the broodiness occurs in goose

Organism:: Anser cygnoides

Type:: Expression profiling by high throughput sequencing

Platform:: GPL26564
6 Samples

Download data: TXT

Series

Accession:: GSE130245

ID:: 200130245

SRA Run Selector

Select item 2001194218.

Transcriptomic Analysis between Normal and High-intake Feeding Geese Provides Insight into Adipose Deposition and Susceptibility to Fatty Liver in Migratory Birds

(Submitter supplied) Geese have a high tolerance of massive energy intake and exhibit little pathological development. We assessed phenotypes and transcriptomes of Tianfu geese to investigate the dynamic expression network behind goose adipogenesis. Goose liver exhibited higher fat accumulation than adipose tissues during fattening. We identified differentially expressed genes that function in several important lipid metabolism pathways, immune response, regulation of cancer, and differentially expressed long noncoding RNAs that might be involved in regulation of these pathways. more...