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zgc:173545 zgc:173545 [ Danio rerio (zebrafish) ]

Gene ID: 100003631, updated on 28-Oct-2024

Summary

Official Symbol
zgc:173545provided by ZNC
Official Full Name
zgc:173545provided by ZNC
Primary source
ZFIN:ZDB-GENE-080215-6
See related
Ensembl:ENSDARG00000092026 AllianceGenome:ZFIN:ZDB-GENE-080215-6
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

See zgc:173545 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (18157224..18158956)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438922 Neighboring gene uncharacterized LOC110438923 Neighboring gene uncharacterized LOC110438920 Neighboring gene uncharacterized LOC100334195

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein zgc:173545; zgc:173545
Names
chemokine CCL-CUd
zmp:0000001037

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423823.1NP_001410752.1  zgc:173545 precursor

    Status: VALIDATED

    Source sequence(s)
    LO018315

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    18157224..18158956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068224314.1XP_068080415.1  uncharacterized protein zgc:173545

    Related
    ENSDARP00000121632.3, ENSDART00000144659.3

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394814.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    80572..82304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068218653.1XP_068074754.1  uncharacterized protein zgc:173545

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001114478.1: Suppressed sequence

    Description
    NM_001114478.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.