si:dkeyp-75h12.7 si:dkeyp-75h12.7 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:dkeyp-75h12.7provided by ZNC
Official Full Name: si:dkeyp-75h12.7provided by ZNC
Primary source: ZFIN:ZDB-GENE-160728-134
See related: Ensembl:ENSDARG00000105583 AllianceGenome:ZFIN:ZDB-GENE-160728-134
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

See si:dkeyp-75h12.7 in Genome Data Viewer

Location:: chromosome: 7

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (24573918..24582112)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (24302713..24311103)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

fj84f06.x1 (e-PCR)
- UniSTS:200090

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: uncharacterized protein si:dkeyp-75h12.7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007118.7 Reference GRCz11 Primary Assembly

Range

24573918..24582112

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021477793.2 → XP_021333468.1 uncharacterized protein si:dkeyp-75h12.7

UniProtKB/TrEMBL

A0A8M9PRS0, A0A8M9Q2C4

Related

ENSDARP00000142970.1, ENSDART00000173681.2

Conserved Domains (1) summary

cl21522
Location:25 → 96

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

Reference GRCz11 ALT_DRER_TU_1

Genomic

NW_018394689.1 Reference GRCz11 ALT_DRER_TU_1

Range

217825..226019

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005172330.5 → XP_005172387.1 uncharacterized protein si:dkeyp-75h12.7

UniProtKB/TrEMBL

A0A8M9PRS0, A0A8M9Q2C4

Conserved Domains (1) summary

cl21522
Location:25 → 96

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...