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Hrct1 histidine rich carboxyl terminus 1 [ Mus musculus (house mouse) ]

Gene ID: 100039781, updated on 4-Jan-2025

Summary

Official Symbol
Hrct1provided by MGI
Official Full Name
histidine rich carboxyl terminus 1provided by MGI
Primary source
MGI:MGI:1917945
See related
Ensembl:ENSMUSG00000071001 AllianceGenome:MGI:1917945
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
3830408D24Rik
Summary
Predicted to be located in membrane. Orthologous to human HRCT1 (histidine rich carboxyl terminus 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Hrct1 in Genome Data Viewer
Location:
4 A5; 4 23.05 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (43727198..43728110)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (43727198..43728110)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 13 subfamily E member 8 Neighboring gene olfactory receptor family 13 subfamily J member 1 Neighboring gene STARR-seq mESC enhancer starr_10058 Neighboring gene small regulatory polypeptide of amino acid response Neighboring gene STARR-seq mESC enhancer starr_10059 Neighboring gene predicted gene, 54217

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
histidine-rich carboxyl terminus protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027511.1NP_081787.1  histidine-rich carboxyl terminus protein 1

    See identical proteins and their annotated locations for NP_081787.1

    Status: VALIDATED

    Source sequence(s)
    AK014425, AL824712, BC096573
    Consensus CDS
    CCDS51169.1
    UniProtKB/Swiss-Prot
    A2ANK5, Q9D6B9
    Related
    ENSMUSP00000092727.4, ENSMUST00000095109.5
    Conserved Domains (1) summary
    pfam15758
    Location:3081
    HRCT1; Histidine-rich carboxyl terminus protein 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    43727198..43728110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)