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Gm2808 predicted gene 2808 [ Mus musculus (house mouse) ]

Gene ID: 100040500, updated on 17-Aug-2024

Summary

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Official Symbol
Gm2808provided by MGI
Official Full Name
predicted gene 2808provided by MGI
Primary source
MGI:MGI:3780977
See related
AllianceGenome:MGI:3780977
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in whole brain E14.5 (RPKM 21.8), CNS E14 (RPKM 18.8) and 25 other tissues See more
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Genomic context

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See Gm2808 in Genome Data Viewer
Location:
17 A1; 17 4.04 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (6776485..6803411, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (6509086..6536014, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 181B, pseudogene Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 5 Neighboring gene fibrillarin pseudogene Neighboring gene predicted gene, 29721 Neighboring gene predicted gene, 53224 Neighboring gene STARR-positive B cell enhancer mm9_chr17:6657759-6658060 Neighboring gene STARR-positive B cell enhancers mm9_chr17:6806288-6806589 and mm9_chr17:6654863-6655163 Neighboring gene dynein light chain Tctex-type 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tubby-related protein 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    6776485..6803411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317770.3 → XP_017173259.1  tubby-related protein 4-like

    Conserved Domains (2) summary
    PHA03247
    Location:518 → 826
    PHA03247; large tegument protein UL36; Provisional
    pfam01167
    Location:985 → 1055
    Tub; Tub family
Nucleotide Protein Strain
Heading Accession and Version

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