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LOC100131770 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa pseudogene [ Homo sapiens (human) ]

Gene ID: 100131770, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100131770
Gene description
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100131770 in Genome Data Viewer
Location:
8q13.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (66481027..66481486)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (66906796..66907255)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (67393262..67393721)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724687 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27479 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19253 Neighboring gene NANOG hESC enhancer GRCh37_chr8:67358104-67358753 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:67370279-67370807 Neighboring gene alcohol dehydrogenase iron containing 1 Neighboring gene ribosome biogenesis regulator 1 homolog Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27481 Neighboring gene uncharacterized LOC124901955 Neighboring gene RNA, U6 small nuclear 1324, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:67453792-67454308 Neighboring gene vexin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030256.1 

    Range
    101..560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    66481027..66481486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    66906796..66907255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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