zgc:174710 zgc:174710 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:174710provided by ZNC
Official Full Name: zgc:174710provided by ZNC
Primary source: ZFIN:ZDB-GENE-080212-8
See related: AllianceGenome:ZFIN:ZDB-GENE-080212-8
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 22

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (27509124..27510023)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (27646672..27647571)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IBA Inferred from Biological aspect of Ancestor more info
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in regulation of DNA-templated transcription	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC100137105

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001114702.1 → NP_001108174.1 uncharacterized protein LOC100137105

See identical proteins and their annotated locations for NP_001108174.1

Status: PREDICTED

Source sequence(s)

BC155768

UniProtKB/TrEMBL

A9JRS0

Conserved Domains (4) summary

COG5048
Location:73 → 208

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:131 → 151

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00096
Location:101 → 123

zf-C2H2; Zinc finger, C2H2 type

pfam13465
Location:115 → 140

zf-H2C2_2; Zinc-finger double domain