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zp3.1 zona pellucida glycoprotein 3, tandem duplicate 1 [ Danio rerio (zebrafish) ]

Gene ID: 100148225, updated on 28-Oct-2024

Summary

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Official Symbol
zp3.1provided by ZNC
Official Full Name
zona pellucida glycoprotein 3, tandem duplicate 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-060817-1
See related
Ensembl:ENSDARG00000090768 AllianceGenome:ZFIN:ZDB-GENE-060817-1
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:171778
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Genomic context

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See zp3.1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (2574420..2578026, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (2398035..2401655, complement)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene si:dkey-248g15.3 Neighboring gene zgc:173556 Neighboring gene zona pellucida glycoprotein 3 Neighboring gene zona pellucida glycoprotein 3, tandem duplicate 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Regulation of zebrafish zona pellucida gene activity in developing oocytes. Mold DE, et al. Biol Reprod, 2009 Jul. PMID 19299318
  2. Tandem-repeated Zebrafish zp3 genes possess oocyte-specific promoters and are insensitive to estrogen induction. Liu X, et al. Biol Reprod, 2006 Jun. PMID 16481590
  3. Transcriptome dynamics in early zebrafish embryogenesis determined by high-resolution time course analysis of 180 successive, individual zebrafish embryos. Rauwerda H, et al. BMC Genomics, 2017 Apr 11. PMID 28399811, Free PMC Article
  4. Transcriptome alterations in zebrafish embryos after exposure to environmental estrogens and anti-androgens can reveal endocrine disruption. Schiller V, et al. Reprod Toxicol, 2013 Dec. PMID 24051129
  5. eIF4E1b is a non-canonical eIF4E protecting maternal dormant mRNAs. Lorenzo-Orts L, et al. EMBO Rep, 2024 Jan. PMID 38177902, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
zona pellucida sperm-binding protein 3.1
Names
zona pellucida glycoprotein 3.1
zona pellucida sperm-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109741.2 → NP_001103211.2  zona pellucida sperm-binding protein 3.1 precursor

    Status: VALIDATED

    Source sequence(s)
    CR759892
    UniProtKB/TrEMBL
    A0A8M2BHI9, F1QIH9
    Related
    ENSDARP00000065820.3, ENSDART00000065821.3

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    2574420..2578026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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