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TRE-CTC1-1 tRNA-Glu (anticodon CTC) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189384, updated on 17-Sep-2024

Summary

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Official Symbol
TRE-CTC1-1provided by HGNC
Official Full Name
tRNA-Glu (anticodon CTC) 1-1provided by HGNC
Primary source
HGNC:HGNC:34952
See related
AllianceGenome:HGNC:34952
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAE21
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Genomic context

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See TRE-CTC1-1 in Genome Data Viewer
Location:
1q21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (146035692..146035763)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (145152578..145152649)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (145399233..145399304, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1627 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1628 Neighboring gene thioredoxin interacting protein Neighboring gene ReSE screen-validated silencer GRCh37_chr1:145432616-145432823 Neighboring gene hemojuvelin BMP co-receptor Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1271 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1272 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1629 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1273 Neighboring gene tRNA-Gly (anticodon TCC) 2-1 Neighboring gene tRNA-His (anticodon GTG) 1-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Glu (CTC) 1-1
  • transfer RNA glutamic acid 21 (anticodon CUC)
  • transfer RNA-Glu (CTC) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    146035692..146035763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    145152578..145152649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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