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Zfp967 zinc finger protein 967 [ Mus musculus (house mouse) ]

Gene ID: 100303732, updated on 17-Aug-2024

Summary

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Official Symbol
Zfp967provided by MGI
Official Full Name
zinc finger protein 967provided by MGI
Primary source
MGI:MGI:3709638
See related
Ensembl:ENSMUSG00000095199 AllianceGenome:MGI:3709638
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm14431
Expression
Ubiquitous expression in bladder adult (RPKM 4.9), cerebellum adult (RPKM 3.9) and 24 other tissues See more
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Genomic context

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See Zfp967 in Genome Data Viewer
Location:
2 H4; 2 98.89 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (176212797..176225614)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (176521004..176533821)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene zinc finger protein 968, pseudogene Neighboring gene predicted gene 14434 Neighboring gene STARR-positive B cell enhancer mm9_chr2:176131206-176131506 Neighboring gene predicted gene 14308 Neighboring gene STARR-positive B cell enhancer mm9_chr2:176454990-176455291 Neighboring gene zinc finger protein 973

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
KRAB box and zinc finger C2H2 type domain containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177404.1 → NP_001170875.1  KRAB box and zinc finger C2H2 type domain containing protein isoform 2

    See identical proteins and their annotated locations for NP_001170875.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon in the 5' region and an internal segment in the 3' region, as compared to variant 1. The resulting isoform (2) is shorter; it has a different C-terminus and lacks zinc finger C2H2 type domain, as compared to isoform 1.
    Source sequence(s)
    CR848808
    Consensus CDS
    CCDS57199.1
    UniProtKB/TrEMBL
    A2ART1
    Related
    ENSMUSP00000104625.3, ENSMUST00000108997.10

  2. NM_001177406.1 → NP_001170877.1  KRAB box and zinc finger C2H2 type domain containing protein isoform 1

    See identical proteins and their annotated locations for NP_001170877.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1) including KRAB box and zinc finger C2H2 type domain.
    Source sequence(s)
    CR848808
    Consensus CDS
    CCDS57198.1
    UniProtKB/TrEMBL
    A2ART2
    Related
    ENSMUSP00000136521.2, ENSMUST00000178443.2
    Conserved Domains (3) summary
    COG5048
    Location:94 → 478
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:208 → 228
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:22 → 63
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    176212797..176225614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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