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si:dkey-112a7.4 si:dkey-112a7.4 [ Danio rerio (zebrafish) ]

Gene ID: 100330171, updated on 27-Mar-2024

Summary

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Official Symbol
si:dkey-112a7.4provided by ZNC
Official Full Name
si:dkey-112a7.4provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-9661
See related
Ensembl:ENSDARG00000104636 AllianceGenome:ZFIN:ZDB-GENE-030131-9661
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
cb118; sb:cb118
Summary
Predicted to enable calcium-dependent protein kinase inhibitor activity and protein kinase binding activity. Predicted to be involved in negative regulation of protein kinase activity. Is expressed in several structures, including EVL; axial chorda mesoderm; periderm; pronephric duct; and solid lens vesicle. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See si:dkey-112a7.4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (22629902..22632885, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (22358745..22361792, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene cholinergic receptor, nicotinic, beta 1 (muscle) like Neighboring gene claudin 7a Neighboring gene si:dkey-112a7.5 Neighboring gene plac8 onzin related protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables calcium-dependent protein kinase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase II inhibitor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    22629902..22632885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021477782.1 → XP_021333457.1  calcium/calmodulin-dependent protein kinase II inhibitor 2

    UniProtKB/TrEMBL
    A0A0R4IFB4, A0A8M9Q2C0
    Related
    ENSDARP00000133038.1, ENSDART00000159867.2
    Conserved Domains (1) summary
    pfam15170
    Location:55 → 84
    CaM-KIIN; Calcium/calmodulin-dependent protein kinase II inhibitor

  2. XM_021477781.1 → XP_021333456.1  calcium/calmodulin-dependent protein kinase II inhibitor 2

    UniProtKB/TrEMBL
    A0A0R4IFB4, A0A8M9Q2C0
    Related
    ENSDARP00000135956.1, ENSDART00000165706.2
    Conserved Domains (1) summary
    pfam15170
    Location:55 → 84
    CaM-KIIN; Calcium/calmodulin-dependent protein kinase II inhibitor

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394687.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    292439..295422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021471895.1 → XP_021327570.1  calcium/calmodulin-dependent protein kinase II inhibitor 2

    UniProtKB/TrEMBL
    A0A0R4IFB4, A0A8M9Q2C0
    Conserved Domains (1) summary
    pfam15170
    Location:55 → 84
    CaM-KIIN; Calcium/calmodulin-dependent protein kinase II inhibitor

  2. XM_021471894.1 → XP_021327569.1  calcium/calmodulin-dependent protein kinase II inhibitor 2

    UniProtKB/TrEMBL
    A0A0R4IFB4, A0A8M9Q2C0
    Conserved Domains (1) summary
    pfam15170
    Location:55 → 84
    CaM-KIIN; Calcium/calmodulin-dependent protein kinase II inhibitor

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395264.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    308792..311804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002662815.4 → XP_002662861.1  calcium/calmodulin-dependent protein kinase II inhibitor 2

    See identical proteins and their annotated locations for XP_002662861.1

    UniProtKB/TrEMBL
    A0A0R4IFB4, A0A8M9Q2C0
    Conserved Domains (1) summary
    pfam15170
    Location:55 → 84
    CaM-KIIN; Calcium/calmodulin-dependent protein kinase II inhibitor

  2. XM_002662814.4 → XP_002662860.1  calcium/calmodulin-dependent protein kinase II inhibitor 2

    See identical proteins and their annotated locations for XP_002662860.1

    UniProtKB/TrEMBL
    A0A0R4IFB4, A0A8M9Q2C0
    Conserved Domains (1) summary
    pfam15170
    Location:55 → 84
    CaM-KIIN; Calcium/calmodulin-dependent protein kinase II inhibitor
Nucleotide Protein
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