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Tpt1l3 tumor protein, translationally-controlled 1 like 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100360791, updated on 10-Jul-2024

Summary

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Official Symbol
Tpt1l3provided by RGD
Official Full Name
tumor protein, translationally-controlled 1 like 3provided by RGD
Primary source
RGD:2321467
See related
EnsemblRapid:ENSRNOG00000033517 AllianceGenome:RGD:2321467
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Tpt1l1
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Genomic context

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See Tpt1l3 in Genome Data Viewer
Location:
1p12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (20926845..20927580)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (19107389..19108208)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (20115903..20116667)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 10-like Neighboring gene ribosomal protein S10 like 2 Neighboring gene L3MBTL histone methyl-lysine binding protein 3 Neighboring gene sterile alpha motif domain containing 3 Neighboring gene transmembrane protein 200A Neighboring gene RNA, U11 small nuclear 3 Neighboring gene high mobility group box 2, pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of ectoderm development IEA
Inferred from Electronic Annotation
more info
  
involved_in stem cell population maintenance IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
translationally-controlled tumor protein-like
Names
tumor protein, translationally-controlled 1 like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    20926845..20927580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039099022.2 → XP_038954950.1  translationally-controlled tumor protein-like

    UniProtKB/TrEMBL
    A0A8I5ZVT0, A0A8I6GKA0
    Related
    ENSRNOP00000093410.1, ENSRNOT00000044222.6
    Conserved Domains (1) summary
    pfam00838
    Location:1 → 167
    TCTP; Translationally controlled tumor protein
Nucleotide Protein Strain
Heading Accession and Version

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