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Rps20-ps11 ribosomal protein S20, pseudogene 11 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362684, updated on 13-Jul-2024

Summary

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Official Symbol
Rps20-ps11provided by RGD
Official Full Name
ribosomal protein S20, pseudogene 11provided by RGD
Primary source
RGD:2324274
See related
AllianceGenome:RGD:2324274
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable RNA binding activity. Predicted to be involved in negative regulation of ubiquitin protein ligase activity and translation. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See Rps20-ps11 in Genome Data Viewer
Location:
5q36
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (160825066..160825584)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (155541751..155542269)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (161889229..161889746)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103692503 Neighboring gene PR/SET domain 2 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene tubulin, alpha 1A, pseudogene 1 Neighboring gene podoplanin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Other Names

  • 40S ribosomal protein S20
  • ribosomal protein S20-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_176832.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000005

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    160825066..160825584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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