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HMGB1P19 high mobility group box 1 pseudogene 19 [ Homo sapiens (human) ]

Gene ID: 100419979, updated on 17-Sep-2024

Summary

Official Symbol
HMGB1P19provided by HGNC
Official Full Name
high mobility group box 1 pseudogene 19provided by HGNC
Primary source
HGNC:HGNC:39101
See related
Ensembl:ENSG00000253463 AllianceGenome:HGNC:39101
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See HMGB1P19 in Genome Data Viewer
Location:
8q24.13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (123123110..123123684)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (124254228..124254802)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (124135350..124135924)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902013 Neighboring gene derlin 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27865 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27866 Neighboring gene RNY4 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19493 Neighboring gene Sharpr-MPRA regulatory region 15016 Neighboring gene TBC1 domain family member 31 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:124160865-124162064 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27867 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27868 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27869 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19494 Neighboring gene tRNA-Met (anticodon CAT) 1-1 Neighboring gene Sharpr-MPRA regulatory region 4427 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:124186535-124187034 Neighboring gene small nucleolar RNA U3 Neighboring gene family with sequence similarity 83 member A

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026129.1 

    Range
    101..675
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    123123110..123123684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    124254228..124254802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)