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LINC02992 long intergenic non-protein coding RNA 2992 [ Homo sapiens (human) ]

Gene ID: 100499194, updated on 10-Dec-2024

Summary

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Official Symbol
LINC02992provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2992provided by HGNC
Primary source
HGNC:HGNC:49287
See related
AllianceGenome:HGNC:49287
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LINC02992 in Genome Data Viewer
Location:
2q14.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (113977669..113979984, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (114402307..114404622, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (114735246..114737561, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ACTR3 antisense RNA 1 Neighboring gene uncharacterized LOC124906071 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16428 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16429 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16430 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16431 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:114647589-114648244 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16433 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16432 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11890 Neighboring gene actin related protein 3 Neighboring gene Sharpr-MPRA regulatory region 10480 Neighboring gene long intergenic non-protein coding RNA 1191 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16434 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11891 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC124907876

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034130.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC110769

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    113977669..113979984 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    114402307..114404622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
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