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C78197 expressed sequence C78197 [ Mus musculus (house mouse) ]

Gene ID: 100504352, updated on 17-Aug-2024

Summary

Official Symbol
C78197provided by MGI
Official Full Name
expressed sequence C78197provided by MGI
Primary source
MGI:MGI:2144636
See related
Ensembl:ENSMUSG00000087242 AllianceGenome:MGI:2144636
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

Location:
11 41.44 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (68083018..68086905, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 52 Neighboring gene syntaxin 8 Neighboring gene STARR-seq mESC enhancer starr_29808 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:67939507-67939823 Neighboring gene ribosomal protein L31 pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:68012718-68012928 Neighboring gene microRNA 6406 Neighboring gene netrin 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:68084195-68084304 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:68084370-68084566 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:68084658-68084931 Neighboring gene STARR-seq mESC enhancer starr_29815 Neighboring gene STARR-seq mESC enhancer starr_29816 Neighboring gene predicted gene, 31954

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000077.7 Chromosome 11 Reference GRCm39 C57BL/6J

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_189021.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL669842
    Related
    ENSMUST00000152781.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    68083018..68086905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)