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LOC100508046 uncharacterized LOC100508046 [ Homo sapiens (human) ]

Gene ID: 100508046, updated on 10-Dec-2024

Summary

Gene symbol
LOC100508046
Gene description
uncharacterized LOC100508046
See related
Ensembl:ENSG00000275563
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward prostate (RPKM 42.3) See more
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Genomic context

See LOC100508046 in Genome Data Viewer
Location:
14q11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (18976748..18980793, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (13289889..13293934, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (20006913..20010958)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene neurofibromin 1 pseudogene 7 Neighboring gene mediator complex subunit 15 pseudogene 6 Neighboring gene NANOG hESC enhancer GRCh37_chr14:20009730-20010231 Neighboring gene POTE ankyrin domain family member M Neighboring gene RNA, U6 small nuclear 1239, pseudogene Neighboring gene ACTB pseudogene 10 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:19979352-19979852 Neighboring gene GRAM domain containing 4 pseudogene 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110505.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL929601
    Related
    ENST00000613990.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    18976748..18980793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    13289889..13293934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)