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Mir3108 microRNA 3108 [ Mus musculus (house mouse) ]

Gene ID: 100526511, updated on 17-Aug-2024

Summary

Official Symbol
Mir3108provided by MGI
Official Full Name
microRNA 3108provided by MGI
Primary source
MGI:MGI:4834327
See related
Ensembl:ENSMUSG00000093241 miRBase:MI0014105; AllianceGenome:MGI:4834327
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mir-3108; mmu-mir-3108
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See Mir3108 in Genome Data Viewer
Location:
8 D3; 8 56.19 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (109663492..109663570)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (108936860..108936938)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene zinc finger homeobox 3 Neighboring gene STARR-seq mESC enhancer starr_22630 Neighboring gene STARR-positive B cell enhancer ABC_E6681 Neighboring gene brown adipose tissue enriched long non-coding RNA 1 Neighboring gene predicted gene, 51548 Neighboring gene STARR-seq mESC enhancer starr_22634 Neighboring gene STARR-positive B cell enhancer ABC_E2273 Neighboring gene STARR-seq mESC enhancer starr_22637 Neighboring gene predicted gene, 42043 Neighboring gene STARR-seq mESC enhancer starr_22646 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:111410618-111410801 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:111411041-111411405 Neighboring gene STARR-seq mESC enhancer starr_22649 Neighboring gene RIKEN cDNA D030068K23 gene Neighboring gene family with sequence similarity 54, member A pseudogene Neighboring gene RIKEN cDNA 4922502B01 gene Neighboring gene STARR-seq mESC enhancer starr_22650

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037295.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC127258
    Related
    ENSMUST00000175500.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    109663492..109663570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)